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Use DeltaCopy (as rsync server) on the Windows box:

http://www.aboutmyip.com/AboutMyXApp/DeltaCopy.jsp

You’ll need to open port TCT/873 in your windows firewall.

Note: To fix the accentuated characters issue in the filenames, you can replace the “Cygwin1.dll” in the DeltaCopy directory by a UTF-8 compliant Cygwin dll (http://www.okisoft.co.jp/esc/utf8-cygwin/). Then restart the service or reboot.

And here’s my bash script running on my Linux box (all the files are in a “backup-tools” directory):

#!/bin/bash

passwdfile=~ACCOUNT/backup-tools/passwd
excludefile=~ACCOUNT/backup-tools/exclude
options="--delete-after --recursive --exclude-from=$excludefile --human-readable --stats --times"

# This gives a  bored user something to watch
if [ "$1" = "--progress" ];
then
    options="$options --progress"
fi

echo "--starting--"

rsync OPTIONNALUSERNAME@SEVERADDRESS::DELTACOPYMODULENAME /WHERETOBACKUP --password-file=$passwdfile $options

echo "--done--"

Then I run it daily in the crontab (command “crontab -e”):

@daily ~ACCOUNT/backup-tools/rsync.sh | mail ACCOUNT -s "daily rsync result"

Ref: http://dailycupoftech.com/windows-backup-with-rsync-and-freenas/